About: Minimap2: pairwise alignment for nucleotide sequences

Facets (new session)
Description
Metadata
Settings
- owl:sameAs
- Inference Rule:

About: Minimap2: pairwise alignment for nucleotide sequences Goto Sponge NotDistinct Permalink

An Entity of Type : wikibase:Item, within Data Space : wikidata.demo.openlinksw.com associated with source document(s)

scientific article published on 01 September 2018

Attributes	Values
rdf:type	Item
description	wetenschappelijk artikel (nl) наукова стаття, опублікована у вересні 2018 (uk) artículu científicu espublizáu en setiembre de 2018 (ast) scientific article published on 01 September 2018 (en)
publication date	wds:Q88639235-35F14B2D-E49B-440C-8DC0-DDC45FEF0F3B
publication date	2018-09-01 00:00:00Z (xsd:dateTime)
cites work	wds:Q88639235-07A48164-D087-4B6D-B6CB-88A167AB8339 wds:Q88639235-085C9821-C982-4E1A-A064-E9BEAA545865 wds:Q88639235-1A9F3C76-7034-4B3B-8BAB-47847EEF8950 wds:Q88639235-1EFE4549-58F4-47B6-AAD7-AC6CDD90C20E wds:Q88639235-31F4E6A6-4687-4137-BADE-8BFD1E4DDCE2 wds:Q88639235-34F42DC6-FA0F-4282-AF51-39AEE1B5A1FD wds:Q88639235-3BD8FC91-6D35-47B8-A677-5A226EF65351 wds:Q88639235-4241D9E6-5D81-4A3F-87AC-B632EB6EB100 wds:Q88639235-4B533B64-7184-4727-845B-81EB08E69F2C wds:Q88639235-52E1029A-B507-4193-9DD6-4AC8A0419557 wds:Q88639235-5999D5C6-E502-4F94-9F41-469E5796915C wds:Q88639235-678ABE2F-8D5F-4AC8-BEE0-0306C45CC2D4 wds:Q88639235-68B1D04B-D2AF-4743-937E-8FCE41923520 wds:Q88639235-6FD7062E-5DAE-4A0D-AD92-7AA765CA3F6D wds:Q88639235-72DE4BE5-6DBC-4E25-82E0-09253B97BC9C wds:Q88639235-7CF7AA29-2CE9-4F4F-96A0-2F6FB79CD63D wds:Q88639235-7EFB0836-E5CC-46BD-9438-FC0E6D088059 wds:Q88639235-828D92A1-A38A-48ED-9E48-B86A45159A62 wds:Q88639235-82FA9295-D023-4D47-884E-D8DDE9A359AF wds:Q88639235-89FAE25D-2AA8-413A-AE1B-A981886914C7 wds:Q88639235-8C56198F-C6EE-4CAB-BAEA-4EE6C76C9ECF wds:Q88639235-92C9F660-C390-40C0-8588-FAF01D59817A wds:Q88639235-95991DF1-5285-4A1B-BF26-8A255F4903C4 wds:Q88639235-A537E722-6450-4775-8718-9A5C12463EA4 wds:Q88639235-AA068721-59B2-45EF-A1C6-10CBCE1E94BA wds:Q88639235-AAA5745B-5E40-4246-983D-FD010CB20FF7 wds:Q88639235-C1EF7F2A-FBD4-42F6-B5C0-2DF11489C302 wds:Q88639235-D725C02C-B8E6-4212-965E-A6EDE216F25B wds:Q88639235-DB7107AA-75F8-4F3B-9000-38566AC995FB wds:Q88639235-E20EC4AE-5C8C-4D6A-866C-403482465593 wds:Q88639235-FE7BE1F9-072B-4019-A474-14A12835C28B wds:Q88639235-FECBE2FA-AEA9-44B7-A09D-E7D2CD1E307D
cites work	Fast gapped-read alignment with Bowtie 2 Evolutionary convergence on highly-conserved 3' intron structures in intron-poor eukaryotes and insights into the ancestral eukaryotic genome An improved algorithm for matching biological sequences. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs GMAP: a genomic mapping and alignment program for mRNA and EST sequences Fast and accurate long-read alignment with Burrows-Wheeler transform PBSIM: PacBio reads simulator--toward accurate genome assembly Optimal sequence alignment using affine gap costs Assembling large genomes with single-molecule sequencing and locality-sensitive hashing Reducing storage requirements for biological sequence comparison. The Sequence Alignment/Map format and SAMtools A framework for variation discovery and genotyping using next-generation DNA sequencing data Integrative genomics viewer Mapping single molecule sequencing reads using basic local alignment with successive refinement (BLASR): application and theory Optimal sequence alignment allowing for long gaps. STAR: ultrafast universal RNA-seq aligner Striped Smith-Waterman speeds database searches six times over other SIMD implementations Fast and sensitive mapping of nanopore sequencing reads with GraphMap Minimap and miniasm: fast mapping and de novo assembly for noisy long sequences Improved spliced alignment from an information theoretic approach rHAT: fast alignment of noisy long reads with regional hashing LAMSA: fast split read alignment with long approximate matches Kart: a divide-and-conquer algorithm for NGS read alignment Nanopore long-read RNAseq reveals widespread transcriptional variation among the surface receptors of individual B cells. Nanopore sequencing and assembly of a human genome with ultra-long reads. Accurate detection of complex structural variations using single-molecule sequencing MUMmer4: A fast and versatile genome alignment system. A synthetic-diploid benchmark for accurate variant-calling evaluation Benchmarking spliced alignment programs including Spaln2, an extended version of Spaln that incorporates additional species-specific features Parasail: SIMD C library for global, semi-global, and local pairwise sequence alignments Edlib: a C/C++ library for fast, exact sequence alignment using edit distance Introducing difference recurrence relations for faster semi-global alignment of long sequences.
author name string	wds:Q88639235-4172D8CD-682F-4B95-A5E6-23FFD13750B6
author name string	Heng Li
rdfs:label	Minimap2: pairwise alignment for nucleotide sequences (en) Minimap2: pairwise alignment for nucleotide sequences (nl)
skos:prefLabel	Minimap2: pairwise alignment for nucleotide sequences (en) Minimap2: pairwise alignment for nucleotide sequences (nl)
name	Minimap2: pairwise alignment for nucleotide sequences (en) Minimap2: pairwise alignment for nucleotide sequences (nl)
title	wds:Q88639235-11938555-7AA6-4B00-99A5-D5E38E2A5325
title	Minimap2: pairwise alignment for nucleotide sequences (en)
page(s)	wds:Q88639235-069C7A9A-BDB8-437C-A564-7A71F47BAB2D
page(s)	3094-3100
instance of	wds:Q88639235-4E5F24F3-A82B-49CE-BF23-F9E1F304F629
instance of	scholarly article
PubMed ID	wds:Q88639235-D4EE97A0-398F-4707-91FD-9D6785E3AFAD
PubMed ID	http://rdf.ncbi.nlm.nih.gov/pubchem/reference/29750242
PubMed ID	29750242
DBLP publication ID	wds:Q88639235-0729935E-4A0B-4BA3-8904-B08CE94BE0F5
DBLP publication ID	https://dblp.org/rec/journals/bioinformatics/Li18
DBLP publication ID	journals/bioinformatics/Li18
published in	wds:Q88639235-1BF8EA0A-86EC-45D1-9614-A86902F90FDA
published in	Bioinformatics
issue	wds:Q88639235-5092D065-0BB1-4893-99AE-E00DB676FC8F
volume	wds:Q88639235-D52E66EF-1EF2-453B-AAFC-8C1A421B790C
issue	18
volume	34
DOI	wds:Q88639235-F449A5D8-C969-4A5D-9510-3CB203B95A24
DOI	http://dx.doi.org/10.1093/BIOINFORMATICS/BTY191
DOI	10.1093/BIOINFORMATICS/BTY191

Faceted Search & Find service v1.16.117 as of May 05 2024

Alternative Linked Data Documents: ODE Content Formats:

RDF

ODATA

Microdata

About

OpenLink Virtuoso version 07.20.3239 as of May 5 2024, on Linux (x86_64-centos_6-linux-gnu), Single-Server Edition (378 GB total memory, 176 GB memory in use)
Data on this page belongs to its respective rights holders.
Virtuoso Faceted Browser Copyright © 2009-2024 OpenLink Software