About: Urea destabilizes RNA by forming stacking interactions and multiple hydrogen bonds with nucleic acid bases

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scientific article published on December 2009

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rdf:type	Item
description	videnskabelig artikel (da) article científic (ca) articolo scientifico (it) artigo científico (pt) bilimsel makale (tr) vedecký článok (sk) vetenskaplig artikel (sv) vědecký článek (cs) wetenschappelijk artikel (nl) wissenschaftlicher Artikel (de) научни чланак (sr) article scientifique (fr) artículu científicu espublizáu en 2009 (ast) наукова стаття, опублікована в грудні 2009 (uk) مقالة علمية نشرت في ديسمبر 2009 (ar) scientific article published on December 2009 (en)
publication date	wds:Q37468260-C5D0F3B7-749C-44D4-AD80-8C739F2DBB91
publication date	2009-12-01 00:00:00Z (xsd:dateTime)
language of work or name	wds:Q37468260-6D13090A-B91F-4EA7-9E4B-60CFD5A15FD0
language of work or name	English
cites work	wds:Q37468260-1AB8ABF9-C1C3-4C9F-99A8-CA0797F30826 wds:Q37468260-22A79893-8A75-45B2-8771-DEF925FAE043 wds:Q37468260-26142249-74ED-4A52-AD6D-26BDC19695BD wds:Q37468260-4272D27B-C8DE-4045-94F4-6BF1171EEC19 wds:Q37468260-429849D8-2820-46F8-9D11-8AA798B280A7 wds:Q37468260-58565175-787D-4831-9640-DFD63C344240 wds:Q37468260-5AB2ED37-3EEE-41D4-8EE4-4669C5853A93 wds:Q37468260-5F7BB6D9-354C-48C4-91DA-9D5572049F2F wds:Q37468260-6576A68A-A1E0-4EAE-BEE4-114CB28B804A wds:Q37468260-6ED8AD5C-C167-41D0-AF15-7A6DE342C003 wds:Q37468260-74F4C5A4-0B6C-4924-9A1B-C974B2FA5179 wds:Q37468260-82AFE447-33F4-4C67-8530-7516EE6FBAF4 wds:Q37468260-88B796A6-F0FA-4830-BD11-C9A3256CCEC6 wds:Q37468260-932292EF-E406-4F2D-B338-FF3E42001CB2 wds:Q37468260-9C37F713-CDD7-4466-8A72-30EA1A1F1237 wds:Q37468260-9EE17A73-30BB-4179-8F20-1AF0ABA782A9 wds:Q37468260-9F014A04-26B2-4CF3-97E5-F04860A12BEE wds:Q37468260-A21CE0EB-0EF8-46BB-8C08-2A7B3C8664AF wds:Q37468260-A53E281A-C95E-4DB6-9680-7CB358B9709B wds:Q37468260-AEAA84BD-D0DB-4163-B046-B3FA08509286 wds:Q37468260-B7413203-6A40-48FA-8C56-22B86CEEFEB3 wds:Q37468260-BFCCAD26-38C5-4166-A3BC-61317B3A9741 wds:Q37468260-D2887497-A826-43C6-B464-7DB04BB44705 wds:Q37468260-EBD6E51D-92FE-48AA-8FE2-8D79E3724A99 wds:Q37468260-F557B9D6-27FF-4AF6-9E65-03A18A93B633
cites work	Protein interactions with urea and guanidinium chloride. A calorimetric study The molecular basis for the chemical denaturation of proteins by urea Protein-facilitated base flipping in DNA by cytosine-5-methyltransferase. Free energy and structural pathways of base flipping in a DNA GCGC containing sequence. Time-resolved synchrotron X-ray "footprinting", a new approach to the study of nucleic acid structure and function: application to protein-DNA interactions and RNA folding. Fast folding mutants of the Tetrahymena group I ribozyme reveal a rugged folding energy landscape Linear extrapolation method of analyzing solvent denaturation curves Thermodynamic parameters for an expanded nearest-neighbor model for formation of RNA duplexes with Watson-Crick base pairs Solution structure of Cobalt(III)hexammine complexed to the GAAA tetraloop, and metal-ion binding to G.A mismatches Denaturant m values and heat capacity changes: relation to changes in accessible surface areas of protein unfolding Altering the intermediate in the equilibrium folding of unmodified yeast tRNAPhe with monovalent and divalent cations Urea unfolding of peptide helices as a model for interpreting protein unfolding THE EFFECT OF COMPOUNDS OF THE UREA-GUANIDINIUM CLASS ON THE ACTIVITY COEFFICIENT OF ACETYLTETRAGLYCINE ETHYL ESTER AND RELATED COMPOUNDS Impact of urea on water structure: a clue to its properties as a denaturant? Folding of RNA involves parallel pathways Applicability of urea in the thermodynamic analysis of secondary and tertiary RNA folding Urea denaturation by stronger dispersion interactions with proteins than water implies a 2-stage unfolding Interactions between hydrophobic and ionic solutes in aqueous guanidinium chloride and urea solutions: lessons for protein denaturation mechanism. Estimates of the ab initio limit for pi-pi interactions: the benzene dimer The dominant interaction between peptide and urea is electrostatic in nature: a molecular dynamics simulation study Effects of osmolytes on RNA secondary and tertiary structure stabilities and RNA-Mg2+ interactions Conserved patterns in backbone torsional changes allow for single base flipping from duplex DNA with minimal distortion of the double helix The interaction of guanidinium ions with a model peptide Chemical denaturants inhibit the onset of dewetting Conformational determinants of tandem GU mismatches in RNA: insights from molecular dynamics simulations and quantum mechanical calculations.
author name string	wds:Q37468260-A92BC24C-BCE2-4615-B348-CB69FA7121AE wds:Q37468260-EDCFE76C-F9B2-4199-BE9B-71556FF872F5
author name string	Alexander D Mackerell U Deva Priyakumar
rdfs:label	Urea destabilizes RNA by forming stacking interactions and multiple hydrogen bonds with nucleic acid bases (en) Urea destabilizes RNA by forming stacking interactions and multiple hydrogen bonds with nucleic acid bases (nl) Urea destabilizes RNA by forming stacking interactions and multiple hydrogen bonds with nucleic acid bases (ast)
skos:prefLabel	Urea destabilizes RNA by forming stacking interactions and multiple hydrogen bonds with nucleic acid bases (en) Urea destabilizes RNA by forming stacking interactions and multiple hydrogen bonds with nucleic acid bases (nl) Urea destabilizes RNA by forming stacking interactions and multiple hydrogen bonds with nucleic acid bases (ast)
name	Urea destabilizes RNA by forming stacking interactions and multiple hydrogen bonds with nucleic acid bases (en) Urea destabilizes RNA by forming stacking interactions and multiple hydrogen bonds with nucleic acid bases (nl) Urea destabilizes RNA by forming stacking interactions and multiple hydrogen bonds with nucleic acid bases (ast)
author	wds:Q37468260-4C876442-07D7-4CBB-ADEF-B24F36C38624 wds:Q37468260-52B1765D-D739-4F62-8543-2653DA513FE8
author	Dave Thirumalai Changbong Hyeon
title	wds:Q37468260-A0A89BCF-2928-4C68-B0A7-C79787963FEE
title	Urea destabilizes RNA by forming stacking interactions and multiple hydrogen bonds with nucleic acid bases (en)
page(s)	wds:Q37468260-F72ED70D-20DE-41D1-9C33-93F531D30313
page(s)	17759-17761
instance of	wds:Q37468260-876D40D8-F2E3-4408-81FE-C1388D9CFB4A
instance of	scholarly article
PubMed ID	wds:Q37468260-7BCF2D82-F5CE-4732-8465-7A0A5BEAF57A
PubMed ID	http://rdf.ncbi.nlm.nih.gov/pubchem/reference/19919063
PubMed ID	19919063
published in	wds:Q37468260-647B2CB2-3DE7-49CB-B9B3-102AB4AF84C2
published in	Journal of the American Chemical Society
issue	wds:Q37468260-FC9EA315-5485-48F1-A958-A0DD98377FF2

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