About: Prediction of functional microRNA targets by integrative modeling of microRNA binding and target expression data

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scientific article published on 22 January 2019

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rdf:type	Item
description	wetenschappelijk artikel (nl) наукова стаття, опублікована в січні 2019 (uk) article scientifique publié en 2019 (fr) artículu científicu espublizáu en xineru de 2019 (ast) im Januar 2019 veröffentlichter wissenschaftlicher Artikel (de) scientific article published on 22 January 2019 (en)
publication date	wds:Q61445398-69C0D759-D291-4F16-8F31-B9B30AEB8952
publication date	2019-01-22 00:00:00Z (xsd:dateTime)
language of work or name	wds:Q61445398-205CDD2D-2261-4CB8-A7DE-1E1DC3A3C908
language of work or name	English
exact match	wds:Q61445398-A6E16110-E9DC-48C6-B7E6-1E1EACC6C3D6
exact match	https://scigraph.springernature.com/pub.10.1186/s13059-019-1629-z
cites work	wds:Q61445398-062C8C28-A167-40E0-8F2D-795813CE122B wds:Q61445398-0CF002E2-AE77-4B1A-8DA3-2C27065D992A wds:Q61445398-28C0867F-A410-484B-9E20-8C4AFFE643AE wds:Q61445398-2945B901-9A57-49B0-A600-0C3E3723B88C wds:Q61445398-297E34AA-39C2-498C-86D2-95291D833368 wds:Q61445398-37959C95-6D18-42EB-BCE2-7A729D7EAEC8 wds:Q61445398-37C29C05-6AD1-436B-BA96-B4624EE8C203 wds:Q61445398-384FD995-90D1-48C3-BD44-9DC4B0E4B97C wds:Q61445398-3A35683E-D475-462F-8B61-B46CFCE3562F wds:Q61445398-3E679487-E36C-4946-B54E-B48B5A91F318 wds:Q61445398-51F0B9E1-8CA0-49C4-81BC-BF55E25EDA55 wds:Q61445398-574EBECE-BDAB-4EDF-9FF7-BC1AA5294A37 wds:Q61445398-58B91ED4-0702-4F10-B718-BF408FC014FE wds:Q61445398-7BEA5974-9AA7-4015-8930-66C114FF3CD2 wds:Q61445398-8160DFBE-766A-4C8E-B84B-EE245B0E5BD8 wds:Q61445398-888ED83D-3614-4491-8DE2-34E67B9356A8 wds:Q61445398-8DF9490C-28A3-4984-9E92-D6463E351C77 wds:Q61445398-928D9326-D938-4EA0-9127-BC23B4ECA17F wds:Q61445398-98D4A5FE-B89E-43DC-87F8-ED8C42CB378C wds:Q61445398-98F1F0F8-2641-4EB1-93C9-24EA68A94B8B wds:Q61445398-B040D3BC-965F-45B3-BAFC-F99AB18B3D08 wds:Q61445398-B3649B87-4A3E-4655-937A-EEB5DAB75D09 wds:Q61445398-B693B856-F8AC-484C-9964-27C07758DAAB wds:Q61445398-B7C64524-DA19-457E-A26D-D11BD6837786 wds:Q61445398-BD8EEF3A-3A0C-4161-A0A8-4A52F6CBD16F wds:Q61445398-CAA352AF-0067-41F9-83F6-09F2FDD7A5BC wds:Q61445398-D7631B6A-21AA-44D8-BB51-A361BF068525 wds:Q61445398-D9DA796C-F661-45D5-8C21-B7A915943F2E wds:Q61445398-DB556D41-7292-422C-A9FF-8599875917EC wds:Q61445398-DBBD3DB4-54A4-4627-BC5B-1831E3033A43 wds:Q61445398-E5F4511D-152E-42D5-969A-571825B71972 wds:Q61445398-EE580D40-E25D-4246-B838-B00F0B189DF5 wds:Q61445398-F19FBB1E-D8AD-4549-9FD0-9BF039EA112A wds:Q61445398-F9D4084B-9F11-4AE2-9AF9-1DB52CAD0153 wds:Q61445398-FCA072F3-DBD7-45E6-9194-6E69A1BE949D
cites work	Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps miRBase: annotating high confidence microRNAs using deep sequencing data A biophysical miRNA-mRNA interaction model infers canonical and noncanonical targets miRDB: an online resource for microRNA target prediction and functional annotations Mapping the human miRNA interactome by CLASH reveals frequent noncanonical binding Database resources of the National Center for Biotechnology Information Predicting effective microRNA target sites in mammalian mRNAs MicroRNAs: target recognition and regulatory functions The impact of microRNAs on protein output Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets Widespread changes in protein synthesis induced by microRNAs Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs The role of site accessibility in microRNA target recognition Serum response factor regulates a muscle-specific microRNA that targets Hand2 during cardiogenesis Potent effect of target structure on microRNA function. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome Incorporating structure to predict microRNA targets Systematic identification of C. elegans miRISC proteins, miRNAs, and mRNA targets by their interactions with GW182 proteins AIN-1 and AIN-2. Detection of nonneutral substitution rates on mammalian phylogenies Accurate transcriptome-wide prediction of microRNA targets and small interfering RNA off-targets with MIRZA-G. CLIP-based prediction of mammalian microRNA binding sites NCBI GEO: archive for functional genomics data sets--update The functions of animal microRNAs Transcripts targeted by the microRNA-16 family cooperatively regulate cell cycle progression Systematic identification of microRNA functions by combining target prediction and expression profiling BLAT—The BLAST-Like Alignment Tool Improving microRNA target prediction by modeling with unambiguously identified microRNA-target pairs from CLIP-ligation studies Comprehensive modeling of microRNA targets predicts functional non-conserved and non-canonical sites Unambiguous identification of miRNA:target site interactions by different types of ligation reactions Composition of seed sequence is a major determinant of microRNA targeting patterns Functional microRNA targets in protein coding sequences Prediction of both conserved and nonconserved microRNA targets in animals. Trends in the development of miRNA bioinformatics tools Rational design of microRNA-siRNA chimeras for multifunctional target suppression.
author name string	wds:Q61445398-621F832B-C4BE-4608-82A4-643FF9F9768B
author name string	Xiaowei Wang
rdfs:label	Prediction of functional microRNA targets by integrative modeling of microRNA binding and target expression data (en) Prediction of functional microRNA targets by integrative modeling of microRNA binding and target expression data (nl)
skos:prefLabel	Prediction of functional microRNA targets by integrative modeling of microRNA binding and target expression data (en) Prediction of functional microRNA targets by integrative modeling of microRNA binding and target expression data (nl)
name	Prediction of functional microRNA targets by integrative modeling of microRNA binding and target expression data (en) Prediction of functional microRNA targets by integrative modeling of microRNA binding and target expression data (nl)
author	wds:Q61445398-A097B8A0-E867-460E-9D13-912D599DFB50 wds:Q61445398-F20CC5C6-A76B-45F0-84F1-8E9C69762594
author	Weijun Liu Xiaowei Wang
title	wds:Q61445398-7E7727AF-620B-456B-B390-B08C1FA4ABF7
title	Prediction of functional microRNA targets by integrative modeling of microRNA binding and target expression data (en)
page(s)	wds:Q61445398-14BCAF62-61CB-4FA0-87F7-E0DCBED57D80
page(s)	18
instance of	wds:Q61445398-7C3B557F-82FC-4005-B555-7E9680B6AB1A

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